YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|51010997, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSIFYTRFF ILLPWILIVI IVIDIDTKRL SVRNTASFYL SRLGNVQQRQ VVRTTRTSSS  60
   61 STTASSSGRN ATSLPVIYAI TPTYSRAVQK AELTRLANTF RQVPQFHWIV VEDANSHTEL 120
  121 VSRFLARCGV RYTHLNVFTP RRFKRTGMPR ATEQRNLALG WIRGHRGSKD KGVVFFADDD 180
  181 NTYSLELFEE MRSTRRVSVW PVGLVGGRRY ERPLVEKGKV VGWYTGWKAD RPFAIDMAGF 240
  241 AVNLQVILSN PRALFKRRGA KPGMQESDFL KQITKVEDLE PKAKNCTQVL VWHTRTEKVN 300
  301 LGNEPKRQQD SVFIEV

Type	Start	End	Confidence
Cytoplasmic	1	6	0.73
Transmembrane Helix	7	25	0.88
Non-Cytoplasmic	26	316	0.90