YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	WRB_DANRE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGFNWFLV LSSVFLCNLV KTFLPSISSF LSKIFHKDAD QEMEMRTEIQ NMKMELSTIS  60
   61 MMDEFARYAR LERKINKMTD QLKTLVKSRT AQQAKMKWIV NIAFYILQAA LMISLILKYY 120
  121 ADPVTVVPSK WIAPLERLVA FPSGVAGGVG ITCWLVVCNK VVALILQAVS

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	25	0.75
Cytoplasmic	26	97	0.95
Transmembrane Helix	98	120	0.90
Non-Cytoplasmic	121	137	0.94
Transmembrane Helix	138	158	0.90
Cytoplasmic	159	170	0.77