YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|20977577, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRSCTIYA TGIVCAHLLI LGIALLLAQV FQTMIQERIK KEITLAENSR VLDGWINPPP  60
   61 PVYMQYFFFN VTNPDEFLAG KEKAKVTQMG PYTYREYRPR ENVTYLENGT KIFATNPKSF 120
  121 VFLRNMSAGD PEVDRVTTVN IPMIAVMNEL NSYSFFVRTA VSMYMGSMGM GLFMNRTVHE 180
  181 ILWGFKDPLL TKLHAMRPEV DEHFGLMYNK NGTHEGEFVF HTGEKNYMNY GKIDTWNGIS 240
  241 QMNWWSSNQS NMINGTDGSV FHTFLSRKEL LYIFAADLCR SIHLGYVRDM EVKGIPAFRF 300
  301 APPSDVLAPP DENPANAGFC VPAGDCLGKG VLKVSVCRQG APIVVSFPHF YQADERYINA 360
  361 IEGMNPNEEE HETYLDINPT TGVPIRACKR AQLNIILKRV RGFPNTKFLN ETIFPIMYVN 420
  421 ETATIDDESA AQMRMLLLIV TVVSNFPVII LALGVILLVV LIFLVCRNRQ RKNEVKRIDF 480
  481 TEAFHSFATT KDETAYTQVS NQAEDSPENR NNQPLRNGSY IAMSPVEAQK C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle