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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FAH2A_DANRE
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALTRFERFL GRLLRAVVWI LFAAFKLFAP QQRHGVSRLP PITNPLLLLS AMQLARKIRR  60
   61 KEVTSVEVVQ AYIDRIQEVN PLINAMVKDR FSAALQEAAQ VDKLIEEETG GEDVLEDRLP 120
  121 LLGVPITVKE AFALQGMPNS TGLLTRRDLV SGADAPSVAL LKRAGAIPLG VTNCSELCMW 180
  181 LESHNHLYGI TNNPYDFERI VGGSSGGEGS ILGAGSSVIG IGSDIGGSIR IPCFFNGIFG 240
  241 HKPSVGIVNN EGQYPPASGQ QMGFLCTGPM CRYAEDLIPM LSIMGGPNAE KLSLFTEVDL 300
  301 KKLRFFSVPH NGGSHLVSPV EPQLLHAQKM VVKRLEADLG VKVQELLIPQ LKYSFQIWGT 360
  361 MMASPGKDGK PPTTFAELMS EGGKKVWPAW ELFKWFLGFS SHTLAAIGLA LVELFQSSHP 420
  421 SPFIMQQKES LQQELEELLG TDGVLLYPSH PLIAQKHHHP IFTPFNFSYT GIFNILGLPV 480
  481 TQCPLGLSAE GLPLGVQIVA GKLQDRLSLA TALYLEKAFG GWREPGKTTI KP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle