YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TM20B_DANRE
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMGGSSSRIA AGLGAALFVG YCIYFDRKRR SDPNYKNKLR ERRKKQKAAQ EKAGLSRLPD  60
   61 LKDAEAVQKF FLEEIQLGEE LLAQGDYEKG VDHLTNAIAV CGQPQQLLQV LQQTLPPPVF 120
  121 QMLLTKLPTI SQRIVSAQSI SDDDIE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.63
Transmembrane Helix	7	25	0.69
Cytoplasmic	26	146	0.62