YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49903846, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFIITLGVL LVSVHIGSSF LIGAFNIKSF GNSKVSNATL LDIITKVVHR YDIILIQEVR  60
   61 DSDLSATSKL MDSVNGGSSP YQYDYIASEP LGRNTYKERY LFVYRSESVS AVNSFHYDDG 120
  121 CEPCGTDTFN REPFVVMFSS KTAVRDFALV PQHTSPEVAV QEIDALHDVV LDTRQRLNTN 180
  181 NIMLLGDFNA GCRYVSNSAW ANIRLRTDQS YTWLIPDSAD TTVTHTNCPY DRIVATPDMM 240
  241 RGVAPGSAQV FDFMEAHGLS QDWALAVSDH FPVEVKLM

Type	Start	End	Confidence
Signal Peptide	1	23	0.78
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	278	0.98