YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50233779, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFIAAIYIIL PLLDVLLSAE ESYFSSSNRL DCVKANELCL KEPGCSSKYR TMRQCVAGRE  60
   61 SNFSMATGME AKDECRLVLD ALKQSPLYNC RCKRGMKKEK NCLRIYWGIY QHLQGNDLLE 120
  121 DSPYEPVNSR LSDIFRLAPI YSGEPALAKE NNCLNAAKAC NLNDTCKKYR SAYISPCTSR 180
  181 VSTAEVCNKR KCHKALRQFF DKVPPKHSYG MLYCSCPLGD QSACSERRRQ TIVPACSYED 240
  241 KERPNCLTLQ VSCKTNYICR SRLADFFTNC QPEPLSLSGC LKENYADCLL SYSGLIGTVM 300
  301 TPNYLRSPKI SVSPFCDCSS SGNSKEECDR FTEFFTDNAC LRNAIQAFGN GTDVSVWHPM 360
  361 PPVQTTTSMT TPSQRARDKD RSPNAIEPAT HINHLNPADN SLYQFCGNIQ AQKKKTNNTI 420
  421 DVLCVDPQID DPSSSNTISK NSSPRQMTLS GLSSQLLLLA TSLHCIFTPV ML

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle