YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28279669, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYACAKFVST PALVRSGSRA LYRPLSASVL SRPDVSSAEA SPAFLPQTAG SQVAVRGFQT  60
   61 SAISRDIDTA AKFIGAGAAT VGVAGSGAGI GTVFGSLIIG YARNPSLKQQ LFSYAILGFA 120
  121 LSEAMGLFCL MVAFLILFAM

Type	Start	End	Confidence
Cytoplasmic	1	72	0.84
Transmembrane Helix	73	99	0.82
Non-Cytoplasmic	100	114	0.73
Transmembrane Helix	115	138	0.93
Cytoplasmic	139	140	0.73