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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34785757, gi|...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRVCWKGAH AAARQCVCGK VKAHPLQHCR RYTTAGNSGS SAGKIVAASL LTVGGGLGGT  60
   61 ILYAKWDPKF RSSIEKSVPY SDQLFDMVLG APPSPPVPIQ KKPETVKPLQ ISSLSEATKD 120
  121 SKQPKAKAKK SDPAPPPSVE EAPAPAPALQ SLEEASAEAA HIISAISEVP SVPAPGTSDE 180
  181 SPSGHSAAAE ECCKECTEPE PAVKERPAEE VTARLAQQDK AELDALAALT AGLEETLGSS 240
  241 AKVTLQAIGA QEAALTAIAA HTDKLREAMD SETPPDEKST QALNEALNER ARAVDDAGEA 300
  301 LFKAKGELEK LRSVIDKAKQ SKIDSARPQI LAAEENLHSM IVDLDKVVTK VQTAQSEAKI 360
  361 VSQYSELVNE AKAQFQQELA NITPEIQANW KGLSGKLSAD DLNSLIAHAH RRIDQLNREL 420
  421 AEQRVREQIH IEVALEQQKL EDQKAQERAV ISALEHSRED MRLEQEKKVQ EVREVMEAEM 480
  481 RTQLRRQAAA HTDHLRDVLK VQEQELREEA QEILNSKMME QETHYRRLTQ EQLDTFTLDM 540
  541 NAAYARLKGI EEAIDSHVIA EEEARKAHQL WLSVEALNYT LKSAGADSPT EPLEGAVRAI 600
  601 KESCAENEFA QALAIAIPEE SLNRGIYSEA SLRARFYDIR RLARRVALID ETRNSLYQYF 660
  661 LSYLQSVLLF ERDQEAPPAK LAPEDLDTFK LLAYATYSIE RGDLELAAKF VNQLRGESQR 720
  721 VAQDWLKEAR LTLETKQVIS LLSAYANAVG LGTTQAP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle