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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47085919, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLAQLRLFG TAVFLLLFLH QSPSAAQEEE KLCKDKFSVG KEDFVLNTDE SVKEGATFLG  60
   61 SPQVSKPEDC VMACCNDPNC NLALMEHRED PKSINTCFII NCLYKQKKVC HFVRKKGFTN 120
  121 YLRKSVFSDY LEQKATDVED RPPRARAGQD RVVQPNEDVT LNGIESSDDK KIVKYEWEQV 180
  181 VGDPSAVMTK GHFADSVTVS NLSPGMYKFR LTVSDEAGQT GSAEVSILVL TREQSLHHCL 240
  241 VPKKEGPCRG SFPRWHYNAA TEKCEEFKFG GCVPNRNNYL ALNECQSACN KVSVSNIGSP 300
  301 APHPSGRIGP IDAVEQCDRP CSPEHFTCDN KCCIGKDLVC DKEKQCSDGS DEKECDKWDY 360
  361 DLVKLRGISP DVSKARCVKP PVTGTCPGSQ TKWYYNPNKR LCYRFNYGGC EGNQNRFETE 420
  421 AGCMTFCSGV TENDKFPEES QFDKQEGKSN NTVAIVMVII LAFAIAILLV IIIAYCLVKG 480
  481 RKKSRNKHQQ LAVNGGHIYR YEDSEKLVYN STTKPI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle