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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47550905, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILVLIPLL WGLGEGAFPS SVQIGGLFIR NTDQEYTAFR LAIFLHNTSP NATEAPFNLV  60
   61 PHVDNIETAN SFAVTNAFCS QYSRGVFAIF GLYDKRSVHT LTSFCSALHI SLVTPSFPAE 120
  121 GETQFVLQLR PSIRGALLSL LDHYDWSRFV FLYDTDRGYA VLQAIMEKAG QNGWQVSAIC 180
  181 VENFNDASYR RLLEDLDRRQ EKKFVIDLEA ERLQNILEQI VSVGKHVKGY HYIVANLGFK 240
  241 DISLERFMHG GANVTGFQLV DFSKPMVIKL MQRWNKLDQR EYPGSESPPR YTSSLTYDGV 300
  301 LVMAEAFRNL RRQKIDISRR GNAGDCLANP AAPWNQGIDM ERTLKQVRIQ GLTGNIQFDH 360
  361 YGRRVNYTMD VFELKSNGPR KIGYWNDLDK LVLVQNELSM GNDSAMENRT VIVTTIMEGP 420
  421 YVMLKKNWEM YEGNEQFEGY CVDLASEVAK HIGIKYKISI VLDGKYGARD PETKIWNGMV 480
  481 GELVYGKAEI AVAPLAITLV REEVIDFSKP FMSLGISIMI KKPQKSKPGV FSFLDPLAYE 540
  541 IWMCIVFAYI GVSVVLFLVS RFSPYEWHTE EPEEGSDGPP SDQPPNEFGI FNSLWFSLGA 600
  601 FMQQGCDFTP RSLSGRIVGG VWWFFTLIII SSYTANLAAF LTVERMVSPI ESAEDLAKQT 660
  661 EIAYGTLDSG STKEFFRRSK IAVYEKMWSY MKSAEPTVFT KTTAEGVARV RKSKGKYAFL 720
  721 LESTMNEYTE QRKPCDTMKV GGNLDSKGYG VATPKGSQLG TPVNLAVLKL SEAGVLDKLK 780
  781 NKWWYDKGEC GPKDSGSKDK SSQALSLSNV AGVFYILVGG LGLAMLVALV EFCYKSRAEA 840
  841 KKLKLTFSEA MRNKARLSIT GSLGENGRVL TPDCPKAVHS GPSYRHGPAL AVVSSDLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle