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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASI1A_DANRE
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRITCTISF STDDEPVGRS RQGSFDDHYK RVVWSKDGEQ GKYQEEGDDP DAYDGPEDEE  60
   61 APDISLATFF GGCSLHGANH VFVEDKKFSI RQGLWALVFL LAISMFLLQV VDRVIYYLQY 120
  121 DYVTLLDERN AKNMTFPAIT LCNYNTFRRS QLSYSDLLFM GPLLGYEDNM APGIPLAPEP 180
  181 DRQGSRFSLA EFFNRTRHRM DDMLLECNFA GKECGAEHWR EIFTRYGKCY TFNSGQDGRP 240
  241 LLITTKGGMG NGLEIMLDIQ QDEYLPVWGE TDETTFEAGI KVQIHTQDEP PFIDQLGFGV 300
  301 APGFQTFVSC QEQRLTYLPP PWGDCKATPI DSDFFNTYSI TACRIDCETR YLVENCNCRM 360
  361 VHMPGDAPYC TPEQYKECAD PALDFLVERD NDYCVCETPC NMTRYGKELS FVRIPSKASA 420
  421 KYLAKKYNKT EQYISDNIMV LDIFFEALNY ETIEQKKAYE LAGLLGDIGG QMGLFIGASI 480
  481 LTILELFDYL YEVIKFKLCR CAKKKHQRSN NNERGAVLSL DDVKRHAPCD NLRTPSTYPA 540
  541 NMLPHHPGQG NFEDFTC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle