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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASI1B_DANRE
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSVMDLKV EPMDIDFDQP PPLQVFAHTS TLHGISHIFS YEKITAKCCL WVVFFLSSLT  60
   61 FLMYVCIDRI QFYLEYPHVT KLDEITTPVM VFPAVTICNL NSIRFSRITR NDLYHAGELL 120
  121 ALLNSRHEVR EAHLVEESVM EVLKSKTDFR SFKPRHFNMW EFYNRTGHDI KDMLLSCQFR 180
  181 GSPCRPEDFS VVFTRYGKCY TFNSGETGPP RVSVKGGMGN GLEIMLDIQQ DEYLPVWGES 240
  241 DESSFEAGIK VQIHSQDEPP FIDQLGFGVA PGFQTFVSCQ EQRLVYLPAP WGSCKSTPPS 300
  301 SDYFRAYSIS ACRTDCETRY LVENCNCRMV HMPGDAPYCT PVLYKECAHP ALDFLVETDS 360
  361 DYCSCETPCN ITRYSKELSF VKIPSKASVK YLAKKYSKSE KYITENVMVL DVFFEALNYE 420
  421 TIEQRKAYEV AGLLGDIGGQ MGLFIGASIL TILELFDYLY EVMKYRLCRC SNKKHHNNNN 480
  481 NTDHNAVFSL DDVNCHVSKF H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle