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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASIC2_DANRE
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLKEACGSE ASRETESGGM GSLGGHSSWQ SFAHRSTLHG LRFIFPYSSS SSSSSSYRST  60
   61 SRRLLWSAAL LASLVLLVLE STERLAYFLS YPHVTSVDAV VSGSLVFPAV TVCNLNAYRF 120
  121 TRLTQNDLYH AGELLALLDV HLQIPEPHLA EPHVLAFLTE KSNFTNYRPK PFSMREFTER 180
  181 VGHDLKEMML YCRFQGQECS HQDFKTVFTR YGKCYMFNAA EEGKTLRTTM KGGTGNGLEI 240
  241 MLDIQQDEYL PVWGETEETA FEAGVRVQIH SQAEPPFVHE LGFGVAPGFQ TFVATQEQRL 300
  301 TYLPPPWGEC VSRALDSGLF QVYSVSACRI ECETRYIVEN CNCRMVYMPG DSPYCTPEQY 360
  361 KDCAEPALAA LSAVEGTNCI CRSPCNMTRY NKELSMVKIP SKTSARYLEK KFNRSEKYIT 420
  421 DNILVLDVFF EALNYETIEQ KKAYEVAGLL GDIGGQMGLF IGASILTLLE LFDYAYEVVK 480
  481 ERLLDLLNRE EEEESHGEDV STCDPVVNHS ESISHTVSVP LQTTLGTLEE IAC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle