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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ASI4A_DANRE
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIEFVCKIK FAEEDEKQKG NQDGDKESLI EESCSPPTKD LAGFASASSL HGINHIFVSG  60
   61 RLGVRQTLWA LAFLVSLALF LYQAAKCAIS YLEHPHVTAL NEEATPEMVF PAVTICNINR 120
  121 FRFSALTDAD IYHLANLTGL PPKNKDGHKP TDLEYPAPDM QDIFNRTGHQ LEEMLKSCNF 180
  181 SGQNCSAEDF TVVYTRYGKC YTFNGNKTTS RKTKQGGMGN GLEIMLDIQQ DDYLPIWKET 240
  241 NETSLEAGIR VQIHSQDEPP YIHQLGFGVS PGFQTFVSCQ EQRLTYLPQP WGNCRSTSEQ 300
  301 MIPGYDTYSI SACRLRCETL EVLRECKCRM VHMPGDANIC TPSDIKCVDK ALALLQKSSG 360
  361 DTCFCETPCN LTRYGKELSM VKIPSKGSAR YLSRKYDKSE DYIRDNFLVL DIFFEALNYE 420
  421 TIEQKKAYDV AGLLGDIGGQ MGLFIGASVL TILEILDYVY EVIKHRLERL LRPQRDDKKQ 480
  481 TQQQQQASTV ATVNLEEMKA KDSSEMSRSH SEGAYANTIL PNHHHHHRTH HRVSEDFAC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle