YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|64966348, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPAHKLLFV VCPMLVLGFI YYSSGKLHLH VWGQKPLFDK QGFMLNLDTK LPLDLAYKYG  60
   61 NLSEGACKPG YAAAKMTAIY PKSKPASMFL DRNFKRLAKV INYLPPFGFR TQERIIDVIL 120
  121 SATKNYGLGP ELDSLICKRC IIVGNGGILS NKSLGSRIDE YDVVVRLNEA PVSGYTRDVG 180
  181 SKTTMRITYP EGAIQKPERY EKDSLFVFSA FKPLDFKWLR QMVYKEKLVR LEGFWKSVAR 240
  241 YVPREPSEIR ILNPYFIQEA AFQFIGLPQN NGLMGKGNIP TLGTVAITMA LHNCDEVAVA 300
  301 GFGYDMNTPH APLHYYESVK MSAIKESWTH NISKEKEFLR KLVKANIITD LTNGI

Type	Start	End	Confidence
Signal Peptide	1	25	0.84
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	355	0.99