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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46250376, gi|...
Protein type: Transmembrane
Type Confidence: 0.64
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYHPFHAHR PADFPMSAFL AAAQPSFFPA LTLPPGLSKP LADHALSGAA EAGLHAALGH  60
   61 HHQAAHLRSF KGLEPEEDVE DDPKVTLEAK ELWDQFHKIG TEMVITKSGR RMFPPFKVRV 120
  121 NGLDKKAKYI LLMDIVAADD CRYKFHNSRW MVAGKADPEM PKRMYIHPDS PATGEQWMAK 180
  181 PVAFHKLKLT NNISDKHGFT ILNSMHKYQP RFHIVRANDI LKLPYSTFRT YVFPETDFIA 240
  241 VTAYQNDKIT QLKIDNNPFA KGFRDTGNGR REKRKQLAMP SMRMYDDQCK VDRDGGDSDD 300
  301 SSCEQTTGRD SVHSPTGPAT SPLKFTRSRE DKNFNESDNG LDQHDDGMIR VSSPEQRPQS 360
  361 PFSPRCEDRV KDRLNLEKKG DYSDSRKEND SAFSIRHLDK DKLDARNVKD QDSSKKEADS 420
  421 VGMSTVKDGF SPLMVQTENP SHFSASHLQS LALSGLHNQH FFNPLSSGQS LLFHPGQFAM 480
  481 TPSAFSTMGM GHLLASMSGA SGLENGSLSS QSTSSPNPFP FHLSQHMLAS QGISMPTFGG 540
  541 LLPYPYTYMA AAAAAASALP AGSAASSLSR NPFLNNTRPR LRFSPYQIPM SFSQSSGLLT 600
  601 TGIPSTMSAE SESSKSGSRE SSPMSEHHSH KTGNGQNTGS PKSSGKDSIN ELQNIQRLVS 660
  661 GLEKHRDASP RSVSPK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle