YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40807102, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.64
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGDHGHAHG KTPLPDYRQW KWEGTPLEVV QKKLAGKGLR DPWARNEAWR YKGTFSIPIS  60
   61 LKDVFLRGFK YGFAAFVVSL AVEYTFFPPE KSKH

Type	Start	End	Confidence
Cytoplasmic	1	67	0.55
Transmembrane Helix	68	87	0.60
Non-Cytoplasmic	88	94	0.88