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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47086685, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRSRRSWF SVLLGLVVGF TLASRLILPR ASELKKAGQK RRASGGGAGG CGGGGGMMMM  60
   61 MKKEYGGVLM PGTEKPSVPQ SSSFLFVGVM TAQKYLNNRA VAAYRTWAKT IPGKVEFFSS 120
  121 EGSDTTIPIP IVALQNVDDS YPPQKKSFMM LKYMHDHYLD QFEWFMRADD DVYIKSEKLE 180
  181 SFLRSLNSSE AIFLGQTGMG ARDELGKLAL EPGENFCMGG PGVIMSREVL RRMVPHIRQC 240
  241 LQEMYTTHED VEVGRCVRRF AGVQCVWSYE MQQLFYENYE PNKKGYIRDL HNSKIHRAIT 300
  301 LHPNKNPPYQ YRLHSYMLSR KIAELRHRTI QLHREIVQMS RYSNTEVHRE DLQLGMPPSF 360
  361 MRFHPHQREE VLEWEFLTGK YIFSSSDGQP PRRGIDSSQK MALDDIIMQV MEMINANAKT 420
  421 RGRVIDFKEI QYGYRRVNPM YGAEYVLDLL LLYKKHKGKT MTVPVRRHAY LQQTFSKIQF 480
  481 LEEEEMDARV LAARINQDSD SLSFLSNSLK MLVPFKLSSP GIEQHEPKEK KINILVPLAG 540
  541 RYEIFLRFMA NFEKICLIPN QNVKLLILLF STDNNTERIK QIELMREYRM KYPKADMEIK 600
  601 PVSGPFSRAL ALEVGSAHFT NDSLLFYCDV DLLFTPDFLT RCRGNTILGE QTYFPIIFSQ 660
  661 YDPKVVYAGK VPSDNHYVFT SKTGLWRHYG FGIVCVYKGD LVKAGGFDVS IQGWGLEDVD 720
  721 LFNKFVQSGI KLFRSTDTGI VHVHHPVVCD PNLDPKQYKM CLGSKASSHG STQQLAELWL 780
  781 EKNNHSFRKI SNSNNESMRT E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle