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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|182891266, gi...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSANSNQV PKLYRSVMED VIAEVRELFL DEGVDEQVLM ELKTLWESKL MQSKAVDGFH  60
   61 TEEQQVLHAQ QQQAQAQQTQ QQTQPQQVLL PPAQTTPQQQ VIVQDAKIMQ HMSATGMSAA 120
  121 ATAATLALPT GVAPFQQLIT PQGQILQVVR AANGAQYIIQ PQQQMLLQQQ VLPQMQPGGV 180
  181 QAPVIQQVLT PLQGGLPQQT GVIIQPQQIV LTGNKVPQNT QVMQAAAMAV QSGPGDAQVQ 240
  241 TQPQAQQQQQ QQQQQASQQP PMMLQVDGAG DTSSEEDEEE EDEYDEDEDE DKEKDGGEDG 300
  301 QVEEEPLNSG DDVSDEEDQE LFDTENVVVC QYDKIHRSKN KWKFHLKDGI MNLNGRDFVF 360
  361 SKAIGDAEW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle