YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|160773414, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARPEQVLLL EPQHELRFRG PFTDVVTTTL KLANPTDRNV CFKVKTTAPR RYCVRPNSGV  60
   61 IDAGTSINVS VMLQPFDYDP NEKSKHKFMV QSLLAPPDMT DTEGVWKDAK PEDLMDSKLR 120
  121 CVFDMPAENE KTHEMESNKI SSLSKSESST LSMKSMASSM DDGEVKKIME ECKRLQTEVQ 180
  181 RLREENKQIR QEDDGLRMRK STVMSAPHSS LAVRVKEEGL SSRVIALIVL FFVVGVIVGK 240
  241 LAL

Type	Start	End	Confidence
Cytoplasmic	1	218	0.77
Transmembrane Helix	219	242	0.83
Non-Cytoplasmic	243	243	0.80