YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33414985
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLGKGLLFV LLLNSVTMCL SLSTCTTVDI DNIKKKRVEA IRGQILSKLR LTSPPQTLGP  60
   61 SQVPYQVLAL YNSTRDLLDG FGKDRHQSCG QDNTETEYYA KEIHKFNMIQ GSPENNDLPY 120
  121 CPKGITSKVF RFDVSIMEKN ASNLFRAEFR ALRMPNLSTS RTEQRIELYQ ILRPDEHIGK 180
  181 QRYIGRKNVM IGGTDEWVSF DVTETVREWL TNRATNLGLE ISVHCPCHTF RPNGEIIENV 240
  241 NEALEVKFRG MDVEDDGPIR SDMGRLKKPK EQNLPHLILM MLPPHGLDVL PTSRRRKRAL 300
  301 DTKYCFSNYE ENCCVRKLYI DFRQDLGWRW IHEPKGYHAN FCSGPCPYLR SADTTHSSLL 360
  361 SLYNTLNPEA SASPCCVPQD LEPLTILYYV GRTPKVEQLS NMIVKSCKCS

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	410	0.99