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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|45827653, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVLVYVSV LLAVMAATEA RPKSGEPKCK SGPVDLVFII DGSRSVRPHE FETMRKFMID  60
   61 IIHELDIGLA ATRIGVVQYS SQVQNVFSLK AFSKTEQMVK AINEIIPLAQ GTMTGLAIRY 120
  121 AMNVAFSAEE GARPNVPHVA VIVTDGRPQD RVAEVAAAAR ESGIEIYAVG VARADMTSLR 180
  181 AMASPPFEDH VFLVESFDLI HQFGLQFQDK LCGMDLCLES DHGCEHICES SPGSYQCLCL 240
  241 PGYTLNEDGK TCTPIDLCAE GKHDCEQICI ASPGSFTCDC NTGYTLNDDK KTCKMIDYCS 300
  301 FGNDSCEHKC VSVLNGFNCR CDEGYSLNED LKTCTMIDYC SFGNDSCEHE CVSVLQSFYC 360
  361 QCRDGYTLNE DETTCTMIDY CSFGNDSCEH ECVSVLNGFH CRCNEGYSLN DDLKTCTMID 420
  421 YCSFGNDSCE HECVSVLKGF HCRCNDGYTL NDDKKTCTMI DYCSFGNDSC EHECVSVLNG 480
  481 FHCRCKDGYT LNEDKKTCTM IDYCSFGNHS CDHHCVSVLN GFFCRCNEGY TLQEDGKTCQ 540
  541 SDNLCNTVEH GCEYQCVSTP GSYHCICPEG HVLQDDGKSC GTCRTSNIDL VLLIDGSKSV 600
  601 RPQNFELVKQ FVNQVVDQLD VSAKGTRVGL VQYSSRVRTE FPLSMYHSKD EIKKAVMNVE 660
  661 YMEKGTMTGL ALKHMVENSF SEAEGARPAE KNIPRVGLVF TDGRSQDDIQ EWAKKAKEAG 720
  721 ITMYAVGVGK AVEDELREIA SDPVEKHFFY SADFTAISQI AENLKLNVCA AESKGDIEVK 780
  781 DPCACESLVE FQQVTMSTIE QLNQKLSAMT KRLEVLEKQL L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle