YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68440965, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSGYKDGTP EEEYAHSPFI RKQGNIYKPN NKEMDNDSIN EKTLQDVHTK EIDLVNRDPK  60
   61 HLNDDVVKVD FEDVIAEPAG TYSFDGVWKA SFTTFTVTKY WCYRLLTALV GIPLALVWGI 120
  121 FFAILSFIHI WAVVPCVKSY LIEIHCISRV YSICVHTFCD PLFEAMGKCF SNVRVTATKV 180
  181 V

Type	Start	End	Confidence
Cytoplasmic	1	104	0.91
Transmembrane Helix	105	132	0.79
Non-Cytoplasmic	133	181	0.76