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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27762280, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLVQRVRP SARLTRPSVL SGPAAAPAAS PRPGPVSCHH LKRYHSSGPA RIRSSFHGRR  60
   61 VCNSILSNRS WGLRSQTAAF SQSMRVYSLP PHQKVELPAL SPTMQMGTIA RWEKKEGDKI 120
  121 NEGDLIAEVE TDKATVGFEM LEECYLAKIL VAEGTRDVPI GAVICITVDK PELISSFKDF 180
  181 TLDKITSSAP AAAAPPPPAT PTSAPAAPQV PGSSYPPHMK VLLPALSPTM TMGTVQRWEK 240
  241 KVGEKLSEGD LLAEIETDKA TIGFEVQEEG YLAKIMISEG TRDVPLGTPL CIIVEKESDI 300
  301 SAFADYVETG VAASPPPAPT LVATPPPAAA PAAPIPAPAA APAAPAAARK GRVFASPLAK 360
  361 KLAAEKGVDI TQVTGTGPDG RVTKKDIDSF VPPKLTPAAA AAPSAPTPSP PAAPAYAAVP 420
  421 TGTFTDVPIS NIRKVIAQRL MQSKQTIPHY YLSIDVNMDQ VLELRKELNA EVKAENIKLS 480
  481 VNDFIIKASA LACLKVPEAN SSWMDTVIRQ NHVVDVSVAV STPVGLITPI VFNAHIKGLA 540
  541 NISKDVSALA AKARDGKLQP HEFQGGTFTI SNLGMYGIKH FSAIINPPQA CILAVGGSEK 600
  601 RLLPADNEKG FDVANMMSVT LSCDHRVVDG AVGAQWLAEF RKFLEKPFTM LL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle