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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47086545, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISCNQLLL LFSCVWGLTM GAFPSSVQIG GLFIRNTDQE YTAFRLAIFL HNTSPNASEA  60
   61 PFNLVPHVDN IETANSFAVT NAFCSQYSRG VFAIFGLYDK RSVHTLTSFC GALHISLITP 120
  121 SFPTEGESQF VLQLRPSIRG ALLSLLDHYD WNRFVFLYDT DRGYSILQAI MEKAGQNGWQ 180
  181 VSAICVENFN DASYRQLLED LDRRQEKTFV IDLEAERLNN MLEQIVSVGK HVKGYHYIMA 240
  241 NLGFKDINLE RFMHGGANVT GFQLVDFSNP MVIKLMQRWN KLDQREYPGS DAPPKYTSAL 300
  301 TYDGVMVMAE AFRNLRRQKV DISRRGIAGD CLANPAAPWN QGIDMERTLK QVRLQGLTGN 360
  361 VQFDHYGRRV NYTMDVFELK SNGPRRIGYW NDADKLVLTQ DHALLPNETY GMENRTVIVT 420
  421 TIMEGPYVML KKNWEMYEGN EQYEGYCVDL ASEIAKHIGF KYKISIVPDG KYGARDPETK 480
  481 IWNGMVGELV YGKAEIAVAP LTITLVREEV IDFSKPFMSL GISIMIKKPQ KSKPGVFSFL 540
  541 DPLAYEIWMC IVFAYIGVSV VLFLVSRFSP YEWHTEEPEE GTDGLPSDQP PNEFGIFNSL 600
  601 WFSLGAFMQQ GCDISPRSLS GRIVGGVWWF FTLIIISSYT ANLAAFLTVE RMVSPIESAE 660
  661 DLAKQTDIAY GTLDSGSTKE FFRRSKIAVY EKMWSYMKSA EPTVFTKTTA EGVARVRKSK 720
  721 GKYAFLLEST MNEYTEQRKP CDTMKVGGNL DSKGYGVATP KGSQLGSAVN LAVLKLNEQG 780
  781 LLDKLKNKWW YDKGECGSGG GGEKDKSSQA LSLSNVAGVF YILVGGLGLA MLVALIEFCY 840
  841 KSRNEAKRMK LTFTEAMRNK ARLSITGSVG ENGRVLTPDC PKAVHSGPSL RQSSGLALVS 900
  901 SDLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle