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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHSTB_DANRE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQTILDLMR MSRICRMVLA TCLGSFILVI FYFQSMFQPV MRRNPFAAEG CCRKGSRNAL  60
   61 QELYNPTQAE FSAAAVLHQA RRDQVAETCR AHSASSRKRR VLTPSDLKHL VVDEDHELIY 120
  121 CYVPKVACTN WKRVMMVLSG RGKYSNPMEI PSNEAHVPSN LKTLNQYSIP DINHRLKNYL 180
  181 KFLFVREPFE RLVSAYRNKF TLRYNTSFHK RYGTKIVRRY RKNATTEALQ SGADVKFQEF 240
  241 AEYLVDPGTQ REAPLNEHWQ TVYSLCHPCH IHYDLVGKYE TLEDDANYVL KLVGEGDSLR 300
  301 FPSFAKSTRT TDQMAAMFFG NISSQQQSQL YQLYKLDYLM FNYSIPSYLK LQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle