YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169158203, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKNVVMIA LFLTGLMCLL ITINKIESKE DVSPKCRRIE EMLHNLTNFP RTQTPEPSSA  60
   61 PCYPNMSAYK LPEFSTLQDH IKDFLLYRHC KSFPMILDVH DKCGGAQNSA DVFLLLVIKS 120
  121 SPENYDRREV LRKTWAEERL HKGVWIRRVF IIGTSRSGFE KHRLNRLLKL ENNENKDILQ 180
  181 WDFNDSFFNL TLKQILFLQW MDRRCPNARF LLDGDDDIFA NTFNMIEYLQ GQEDNDGSRH 240
  241 LFTGHLLQKV KPIRKLSSKY YVPVQIHESN RYPPYCGGGG FLLSGFTART IYKMSHSIIL 300
  301 LPIDDVYMGM CLEKAGLQPT FHFGVRTFGM NVPIKNADKL DPCYYREILV VHRFQPHMIF 360
  361 VMWNEIQNPD LQCSKTHYSL QTSTTSSVFM

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	390	0.97