YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47086315, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLESRAFLD VEEGELPLPL VMVSRRKAGS SKSGVWRVFG TILAVGLCAA AAVCFTLHKT  60
   61 QGNQQDGSVL RLTLRDRISQ GNFTSKAAIH LTGGYNSESK TLDWRDDQDQ AFSSGGLKLV 120
  121 NREIIIPDDG IYFVYSQVSL HISCTSELTE EQVLMSHAVM RFSESYGGKK PLFSAIRSIC 180
  181 TQEPESENLW YNTIYLGAAF HLREGDRLGT DTTTALLPMV ENDNGKTFFG VFGL

Type	Start	End	Confidence
Cytoplasmic	1	34	0.96
Transmembrane Helix	35	55	0.96
Non-Cytoplasmic	56	234	0.98