YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47086221, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGCRPCVF ILVVLLLLPS AIMAYRPVII IHGLFGGPVQ MTPLVNLIKE SHPGTSVTAV  60
   61 SLYDYTDSVK PMWDQVEGFK KVLQPIIEST GDGVHLICYS QGGLICRGVL ATLPQHNAHS 120
  121 VIFLSSPLAG QYGVTRAISG VFPKLPKSSL HNVCYTELGQ KTSFCSYWND PHHREKYLNS 180
  181 SVFLAPLNGE VEHVNSTEWR NNFLRIKTMV LIGGPNDGVI LPWQSSMFGS FDSDGKVIDM 240
  241 ENQDFYVRDT FGLKTLKSQS AVWKCIVPGV KHNFWPSDPR VFQNCIEKWL T

Type	Start	End	Confidence
Signal Peptide	1	24	0.98
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	291	0.99