YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|134054388, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCVLVLALL ASASAQRLSR GCGSCDRTQC APLPAQGCSS GTLRDSCGCC ELCAAAEGEF  60
   61 CGGRGVSARR CGSGLECVKP DKKSKSGICV CKSGVPVCGT DGRNYNSGCA LRAASARALQ 120
  121 EKQPEIRVHN TGRCAQGPEI VTPPGEVWNI TGSQVFLSCE AIGVPTPVLT WRKVSGGSEK 180
  181 PVPLPGDKDN LAVQTRGGPE KHQVTGWVLI SPLTKAEDGS YECHASNTQG EASAVGSIHV 240
  241 VESISDIPVQ MVKDSEL

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	257	0.99