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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47086179, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDITVLLLSA LLGFVSDVGA NTDSNPCISA NAKTCGECIQ IGPQCVWCKD PDFKPSRCDD  60
   61 IESMAKAGCT ADGVENPRGA VTIDKNKPVT NRKTDGGQNL RPDEITQIQP QKVKLNLRSG 120
  121 EAQKFTLKFK RAEDYPIDLY FLMDLSHSML SNLENFKNLG TELANEMKDI TKDLRIGFGS 180
  181 FFRKPSIQTN PCFPDNCIAP FSYFNVLSLT DDHALFTQEI SKLKTSGNLD SSEAGLEALM 240
  241 QAAVCTDVIG WRNATRVLVF FTDAGLRFSG DGKRGGIVHL NDGKCLLDDN MYTRSDYSDY 300
  301 PSLSQLVDTV TDNSIYTIFA VTEQFRDLYQ ELSAKVPNSA VGTLSTSGDN LAKLVIDALI 360
  361 PLSSEVIVEN SKLPDGVSIS YVSHCKNGVN GRGEDGRKCS NISIGDEVLF DIEITAKGCP 420
  421 SKGKPETIKI KPLGLSEEVE IFLNYICECE CHKDGIKNSP KCSGGQGTLE CGVCRCNEGR 480
  481 SGRLCECSHD KLLADDLDAY CRMNNGTEVC SNNGECVCGI CECKKRENLE ERYSGNYCEC 540
  541 DNLSCDRFNN NICGGHGRCV CGQCKCEFNY AGNACQCSMD TSSCLASNKL ICNGHGICEC 600
  601 GQCKCLDNCQ GPTCEICLT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle