YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33604227, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIRRILLSI FLLSGLLTCY GFRICAFNVQ SFGDSKSADA KIMNSISRIV ARCDICLLQE  60
   61 VRDQKNKAIP RLLEAVNKIG DNDFQYVASE RLGRTQTYQE QYVFFYRKST AILKGQYQYP 120
  121 DTQTGDVDAF SREPFVVYFQ APKTLAKEFV LIPQHTTPSN ATKEIDELYD VFVDVKGRWE 180
  181 TENVMFLGDF NAACGYVAKK NRKNIRLYTD PSFTWLIQDN VDTTVKESTD CAYDRIVVHG 240
  241 EPFLRSIEPF SAQPFNFPKE FLLTEAQALE VSDHYPIEVV LKDVKSRMST RYSEAPCLLP 300
  301 AVFVLNALLL MQMIV

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	315	0.98