YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47085891, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANNGTDGNG VKYYRLSEVE ERNSFKSTWI IIHNKVYDVT KFLEEHPGGE EVLREQAGGD  60
   61 ATESFEDVGH STDAREMASS MLIGEVHPDD RDKIAKPPES LVTTVQETTS WWSNWLIPAV 120
  121 AAVIVTLMYR IYTAEEA

Type	Start	End	Confidence
Non-Cytoplasmic	1	110	0.55
Transmembrane Helix	111	133	0.78
Cytoplasmic	134	137	0.41