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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29179663, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYIGNQCCVV LSIFLYISGC LGENYDIDDS LGLGQTFDGI GGLSGGGATS RLLVNYEEPY  60
   61 RSQILDYLFK PKFGASLQIL KVEIGGDAQT TDGTEPSHMH YEDDENYFRG YEWWLMVEAK 120
  121 KRNPNITLIG LPWAFPGWVG NGKNWPYDFP DITASYVVAW IHGAKKYHDL DIDYIGIWNE 180
  181 KSFNVKYIKL LRYLLDKRGL EKVKIIASDD LWEPITSAVF ADKELYDAIE VLGVHYPGTK 240
  241 TVPRALKTGK KLWSSEDYST FNDNVGGGCW ARILNQNYVN GKMTATISWN LVASYYENLP 300
  301 FGRDGIMTAN EPWSGNYVVE SPVWTTAHTT QFTEPGWTYL QTVGHFTHGG SYVALTDQRG 360
  361 NLSIITETMT HDHSVCIRPP LRPYNVTVQN VTFNLKGTFA FISQLDVWHS KFDFKTDKTV 420
  421 LFQKLDPVKV IGGSFSIELD VDEIYTFTTI TNGQRGTYPD PPPSAPFPKS YRDDFNVSGN 480
  481 FSEAPNFADQ TGVFEYFTNL TDPGPHVFTL RQVVTQRPIT WAADADQTIS VIGDYGWHDI 540
  541 MVSCDVYMEA VQTGGVFIAA RVDRGGGVIR STRGVFFWVY ADGTYKITND LRGLAVLAKG 600
  601 SAGTRARTWY TLTLRVQGNY ASADLNGYSL WKNAVLLNPL HGWVAIGTSS FQLAQFDNFV 660
  661 IEAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle