YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|47085723, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFQVGFFVL LSVTTIGAFP RNAFQREFHR HVAKDFESSG NGPDEPVRGS VRIVKLNPHF  60
   61 LRRAAVSHVP FRNSPSRGAF PAFLALGRPG PAILTHSKPA PQVSSSADRR KQGLEMWKKV 120
  121 VHKSERKKEA VALRINPKDM NKQSCAAVPF TQRITEEGCE TVTVHNNLCY GQCSSMFVPS 180
  181 SGGSHGQQKA QCMRCGPSRA RSVLLHLRRG SEVRERRVLI VEECKCETSS EEAKVQNTDM 240
  241 FNL

Type	Start	End	Confidence
Signal Peptide	1	20	0.90
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	243	0.98