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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|23343501, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPVAGLLLC VTAVLCTSAL GAGPRLDNGK LYRYSYGTEV GLNRPTGSPE GNVGFRISSD  60
   61 VDINLAWRNP EIQDEQLLQV QISNIQVESA GKHSRKNNIF HGSSAESILG KVRLEALQRP 120
  121 FLVLWKMGKI RSLYAQKAEP ATVKNLKRGV ASMLMMQLKS GKMSEADASG KCLVEYKVNK 180
  181 HQVIRTKHLE TCKSQETGFT THSPVLGISG KCAAETVITL ENGIIKSADA KETHVLSINA 240
  241 RHKAATKVLS RQSLTLKAIE AGPAEVAGKD VAGVVKALDD KFLSVGVIVE KTKPKCKGCP 300
  301 NLMETWKAVR SQLEPNSLSK AEAPRSFLTL VHSLRKSSKS EILTVLQNCS KTALPQLVDA 360
  361 VTSAQTPSSL SAILEFLDFS KKDGLILQER FLYACGFASH PTESMLQSLL EVSQGKIGST 420
  421 EIKESVVIIM GALLRKLCLK GACDLPVVLK VKELLLAGPD STQEESEVQM YLLALKNALL 480
  481 PEGIPVLTKY AESEVGAYST IAITALQRYD PALITAEVKK ALNRIYHQNQ RIYEKNVRAA 540
  541 AADVIMSSNP SYMEVKNLLL SIGHLPHEMN KYMLSKIQDV LRFQMPAYKL VRQVMKDMIS 600
  601 HNYDRFSKTG SSSAYSGFMA ETVDVTCTYN LDILYSGSGV LRRSNMNIYG QSNNALLHGL 660
  661 QVTIEAQGLE SPIAATPDEG EEELESFAGM SALLFDVQLR PVTFFKGYSD LMSKMFSTSG 720
  721 DPINVVKGLI LLTDHSQVIP LQSGLRASAE FQAGLSIDIS GGMEFSLWYR ESKTSVNNRG 780
  781 ALVIIGNMTV DTDFVSAGVE VGFETEATLD FITTVQFSEY PFLVCMQMDK TTFPFRETVS 840
  841 KQEKLPTGQM FSRKRSRDQV VPGSEFPLHQ ENSNMCKKVF EPAW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle