YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CISD2_DANRE
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLESISKII KIQLPAYLKK LPLPETIGGF ARLTVSEWLR LLPLLGILAL LGYLTIRPFL  60
   61 PKKKKQRDSL INLKIQKENP KVVNEIDIED LRTPNVCYCR CWRSKTFPVC DKSHIKHNEL 120
  121 TGDNVGPLIL KKKTL

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.72
Transmembrane Helix	38	60	0.84
Cytoplasmic	61	135	0.77