YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45387713, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWDVEIRGMA SAHAIIASSI FMATVMPAAL VNKFSVYGTH MVWLYCVAGS ITVVNIAVFW  60
   61 LLGISPPTKK NTLSYKISRF FRSCLYFLLS CLFFHTVVVL YGAPLLESAL ETFSLAVLLS 120
  121 TLTTLRCLCI LGPNVQAWIR VFSRDGAMSV WDTSLQITTG CSVIGAWLGA FPIPLDWDRP 180
  181 WQVWPISCTL GATIGFLTGL LAAPVWIHWH RKQLTYKLK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.94
Transmembrane Helix	10	31	0.92
Non-Cytoplasmic	32	40	0.87
Transmembrane Helix	41	64	0.93
Cytoplasmic	65	83	0.93
Transmembrane Helix	84	105	0.92
Non-Cytoplasmic	106	111	0.85
Transmembrane Helix	112	135	0.84
Cytoplasmic	136	149	0.87
Transmembrane Helix	150	171	0.89
Non-Cytoplasmic	172	185	0.78
Transmembrane Helix	186	209	0.88
Cytoplasmic	210	219	0.97