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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ECHP_DANRE
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARYELVKRS VALITLTNPP VNALSSAVRH AISKTMERAL SDPKVTAVVI CGENGRFCGG  60
   61 ADIREFAGPL RGPPLVPLLD AIEAGEKPVV AAIEGVALGG GFELALVCHY RIAHYKARLG 120
  121 LPEVTLGILP AAGGTQRLPR LIGIPAALEL ITTGRHVSAQ EALKLGMVDQ VTEQNTCEVA 180
  181 LEFALKAVGK PLSSRRLSML TTPCPPGLDG IFEAATMQVQ KKARGVMAPL ACVQAVRAAT 240
  241 LPYSEGIKRE GELMATLFSS GQAQALQYSF FAQRTAEKWT LPSGAQWNNS KPREIQSAAV 300
  301 IGLGTMGRGI VVSLARVGIS VIAVESEKKL LETGRQMVIG MLERDAKRRG VSASLNLLKF 360
  361 SLSLQDLKDV DLVIEAVFED MALKKQIFRE LSRVCRPATL LCSNTSGLDV DALADVTDRP 420
  421 QLVAGMHFFS PAHVMKLLEV VCGPRSSKEA IATAMSLGKR MGKVSVAVGN CPGFVGNRML 480
  481 MPYLEQATFL LEEGATPQQI DKALEDFGFA MGVFRMSDLA GLDVGWRVRK ESGLTGPDVD 540
  541 PKDPPRRRQG RKYCPIPDMV CQQGRFGQKT GRGWYMYDKP GDTNAKPDPL IQNLLETYRS 600
  601 RYGIQPRKIT DQEIIERCLF ALANEGFRIL KDKIAGQPED IDVIYLFGYG FPRHRGGPMF 660
  661 YASMVGLERV LERLEYYHHA LPDVPHLEPS PLLKKLVARG SPPIQKWREH IKSMHSHL

YRC Informatics Platform - Version 3.0
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