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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C1GTB_DANRE
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALGARSAF YVGFLVGTCS LYLLLRQAGF TRDSGSREPG THDKTLLEML EEENKNWKKE  60
   61 RSALFNLNHP HHTGEDGALA DSLYKRVRIL CWVMTGPDNL EKKARHVKAT WSRHCNIVVF 120
  121 ISSVDNPDFP TVGLNTKEGR DQLYWKTIRA FHYVMEKHSD EADWFLKADD DTYVIVDNLR 180
  181 WILARHSPED PVYFGRRFKP YVKQGYMSGG AGYVLSKEAL RRFVEGFRTK VCTHTTSVED 240
  241 LAMGQCMEKI GVKAGDSRDT MQRETFHPFV PESHLTGTFP KTFWYWNYCY YPIVQGPQCC 300
  301 SDLAVSFHYV DASHMYLLEY YTYHLRAFGY KYRYQPPEPN VKAPEKVETR VLEQKDKVEA 360
  361 QEEENQSPEL NDKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle