YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|182889298, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYASVMDNIF LLVLVTLLSV VQNVFFALKV EKECTGHQSK RSAAFERLSC AKRNCMDTYP  60
   61 TFLAVLWCAG ICLSQAPAAF AGILYLVVRQ KYFVGYLGET SQSTPGFLFG KRILFFLSLM 120
  121 CVVGIINHLM LTYGGSDYKE YIQTITKAAS TLLLLP

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.44
Transmembrane Helix	8	28	0.80
Cytoplasmic	29	62	0.51
Transmembrane Helix	63	87	0.88
Non-Cytoplasmic	88	107	0.52
Transmembrane Helix	108	131	0.84
Cytoplasmic	132	156	0.50