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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41055373, gi|...
Protein type: Transmembrane
Type Confidence: 0.51
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWRSIVVGL LVLRVLLNCA VWLVFGLGPS WGFDFPIKFT FNSHKIELFN DGERATVKTN  60
   61 AWLRHLYDSR NPQAKTCSKI SGNSPKKSYL SFFEEGRDEY DRKYSSFPDA LKVKMRAMAR 120
  121 DMFYFGYDNY MKFAFPEDEL NPIACEGRGP DVLNPSNINI NDVLGNYSLT LIDTLDTLLV 180
  181 LGNVTEFHRA VKLVIDTVSF DKDSTVQVFE ANIRILGSLI SAHILLTDPR HPFGDVGLKD 240
  241 YDNELLHLAH DLAVRLLPAF ENTSTGIPYP RVNLKNGVPP DSINETCTAG AGSLLVEFGI 300
  301 LSRLIGDSTF EWVARRAVKA LWRLRSNETG LLGNVVNIQT GQWVGKQSGL GAGMDSFYEY 360
  361 LLKSYILFGE KEDFRMFTAA YESIQSHLRR GREACNEGEG DPPLYVNVNM FNGQIMNTWI 420
  421 DSLQAFFPGL QVLNGDVENA ICLHAFYYAI WKRFGALPER YNWQLQAPDV LFYPLRPELV 480
  481 ESTYLLYQAT KNPFYLHVGM DILESLEKKY QSEVWLRYSS SCSG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle