YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50925106, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTCAKFVST PALVRAGSRS VYRPVSAAVL SRPEAKPEVS TAAILQSPVA QMALRSFQTS  60
   61 AVSRDIDTAA KFIGAGAATV GVAGSGAGIG TVFGSLIIGY ARNPSLKQQL FSYAILGFAL 120
  121 SEAMGLFCLM VAFLILFAM

Type	Start	End	Confidence
Cytoplasmic	1	71	0.83
Transmembrane Helix	72	98	0.82
Non-Cytoplasmic	99	113	0.71
Transmembrane Helix	114	137	0.93
Cytoplasmic	138	139	0.71