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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41053505, gi|...
Protein type: Transmembrane
Type Confidence: 0.56
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSKLPKIR DEERESQFGY VHGVSGPVVT ASSMAGAAMY ELVRVGHSEL VGEIIRLEGD  60
   61 MATIQVYEET SGVCVGDPVL RTGKPLSVEL GPGIMGSIFD GIQRPLKDIN DLTQSIYIPR 120
  121 GVNIGALNRD LKWDFTPINN LRVGSHVTGG DIYGLVNENS LIKHKLMLPP RSRGTVTYVA 180
  181 PPGNYDVSDV VLELEFEGVK EKFTMVQVWP VRQVRPVTEK LPANHPLLTG QRVLDALFPC 240
  241 VQGGTTAIPG AFGCGKTVIS QSLSKYSNSD VIIYVGCGER GNEMSEVLRD FPELTMEVGG 300
  301 KVESIMKRTA LVANTSNMPV AAREASIYTG ITLSEYFRDM GYNVSMMADS TSRWAEALRE 360
  361 ISGRLAEMPA DSGYPAYLGA RLASFYERAG RVKCLGNPER EGSVSIVGAV SPPGGDFSDP 420
  421 VTSATLGIVQ VFWGLDKKLA QRKHFPSVNW LISYSKYTRA LDEYYDKHFQ EFVPLRTKAK 480
  481 EILQGEEDLA EIVQLVGKAS LAETDKITLE VAKLIKDDFL QQNGYTPYDR FCPFYKTVGI 540
  541 LSNMIAFYDL ARHAVETTAQ SDNKITWAQI REHMGEILYR ISSMKFKDPV KEGEAKIKAD 600
  601 YAQLLEDMQN SFRTLED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle