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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|34785747, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPCIFYLVL LAPLFAHCAV KPVSVEEVSR NEEELQEFDA LNSLLSDFEV LPASGLQLHS  60
   61 VRKRDADAHS HVERLVSFTA LQRNFKLYLT TNTQLFTENF SAVFVDENGK EDQFDVQIQN 120
  121 YFKGHVVGEE HSRVQAHIDG DEFSAHIITE ETEYNVEPLW RFTETPPDGR LLVYRSEDIK 180
  181 NISRLSSPKV CGYVNADAQE LLPEEARAAE EMEEMKEEPH NRERRSTHDQ KKNTCTLLLV 240
  241 ADHRFYKHMG RAEESTTLNY LIELIDRVDD IYRNTSWDDD FKGYGVQIQQ IIINKDPTKV 300
  301 APGEFHYNMD GSPTGRKDGV WDVKKLLEQF SYDIAANASR ACLAHLFTYQ DFDDGTLGLA 360
  361 YVAPSKPGLG GLCPKPYYPS QSVKKPSYLN TGLTSTMNYG KTILTKEADL VTTHELGHNF 420
  421 GAEHDPDNIA SCAPSDDQGG KYVMYPIAVS GDHVNNKHFS TCSKISVSKT LRIKVNQCFV 480
  481 ERSSKLCGNS RVEEDEDCDP GLLHINDDPC CTSNCKFRKQ AQCSDRNSPC CKNCMFESAD 540
  541 KVCQEVITAT CKGTSQCTGN SSECPTPGNL EDNTECVDKG RCQNGQCRPF CEAVHNLESC 600
  601 ACNETENSCK VCCRKDELCT PFLNGGSFLY LRKGKPCTVG FCDGAGKCMK QVQDVIERLW 660
  661 DFIDKLNINT FGKFLADNIV GSVVVFSLLF WIPISILVHC VDKRLDEQYE ENTKMMYPSS 720
  721 GEILSSLESV PVRIFKAHHV HSPAARPQLS MAPTGPGSTP AQETLGGPGH PSLSAAPKAD 780
  781 QLRMATIEED PSGDSFHPDE EEGFRLSGTA ARSFEDLTEQ ATPSHKRRLK RQARIESKET 840
  841 EC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle