YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|94733457, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSLREWFK EYMSERRGRK NRLVTKDGRC NIEFGNVMHR NRFAYVLDFW TTFVETRWRF  60
   61 ILLYFVASFT LSWFIFGLIW YWLARNNGDL LWQNPPPGHK PCAFSVNDMT YAFLFSLETQ 120
  121 STIGFGNIYV TDQCPGGVAL IVIQTIIGLF INIFWCGIVM TKISLPKKRA KTITFSESAV 180
  181 ICPKKGTLCL QIRVANLRKT LMIGSQIYGK LLRTTVTGGE TVILDQVSID FMVDAGKDNL 240
  241 FFVCPLTLYH IIDKSSPFFN MAVDTMHQQD FELVVFLDGM AESTSSACQV RTSYIPQEIM 300
  301 WGYDFLPIIS RSKEGRYRVD FSNFAKVVPV PTAHCSHCYH NEPGNHLHLK GIDNKGFEVI 360
  361 DIEPPNGTKM

Type	Start	End	Confidence
Cytoplasmic	1	59	0.98
Transmembrane Helix	60	83	0.94
Non-Cytoplasmic	84	137	0.95
Transmembrane Helix	138	159	0.92
Cytoplasmic	160	370	0.96