YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41053839, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSVTQEYM QIPAVTRAYT TACVLTTAAV QLELITPFQL YFNPDLILKK YQIWRLITNF  60
   61 LFFGPLGFSF LFNMIFLYRY CRMLEEGSFR GRTADFVYMF LFGGVLMTLF GLFSNLFFLG 120
  121 QAFTIMLVYV WSRRNPFVRM NFFGLLNFQA PFLPWVLMGF SLLLGNSIVI DLLGIGVGHI 180
  181 YYFLEDVFPN QPGGRKLLAT PGIFRFLFDP PQEDPNYAPL PEDPSGMSWN GQGVEDQNED 240
  241 DLQRDEN

Type	Start	End	Confidence
Cytoplasmic	1	17	0.83
Transmembrane Helix	18	35	0.80
Non-Cytoplasmic	36	55	0.71
Transmembrane Helix	56	78	0.88
Cytoplasmic	79	95	0.75
Transmembrane Helix	96	119	0.88
Non-Cytoplasmic	120	150	0.60
Transmembrane Helix	151	175	0.79
Cytoplasmic	176	247	0.71