YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|156914733, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLGSNLQD KGAKAVSVED GFQNVPLITP LDVTNLQYQA PDKVVVKTRT EYQTEQKNKA  60
   61 KLKVPKVEEF TISVTDGVSE RLKVTILIVL ALAFLACIVF LVVYKAFTYD HTCPDGFVYK 120
  121 HKRCIPASLE AYYTAQDGNS RGRFYTVISH YSMAKQTTSR SLSPWLPAGS AQHDVKPPNT 180
  181 DSQ

Type	Start	End	Confidence
Cytoplasmic	1	83	0.87
Transmembrane Helix	84	107	0.85
Non-Cytoplasmic	108	183	0.89