YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|41053621, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAFRAGLLT PALTKGKSSS ISAIIRGARA ASGSSKDSLP GPYPKTAEEK AAAAKKYNMR  60
   61 PEDYQPYPDD GWGSGDYPML PSRSQHERDP YYQWDHPDLR RNWGEPMHYH FDMYIRNRVD 120
  121 TSPTPLDWRT MRLWLFGFLG LTMFMFGMGE VLPSYQPVAA KQYPYNNLYL ERGGDPEKEP 180
  181 EPVKNYEI

Type	Start	End	Confidence
Cytoplasmic	1	132	0.71
Transmembrane Helix	133	152	0.79
Non-Cytoplasmic	153	188	0.83